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  5. Zm00001e003794_P001

Zm00001e003794_P001 (ABF2, ATAREB1, AREB1,...)


Aliases : ABF2, ATAREB1, AREB1, Zm00001e003794

Description : transcription factor (bZIP)


Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003794_P001
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT1G45249 ABF2, ATAREB1, AREB1 abscisic acid responsive elements-binding factor 2 0.05 OrthoFinder output from all 47 species
AT3G19290 AREB2, ABF4 ABRE binding factor 4 0.03 OrthoFinder output from all 47 species
AT4G34000 DPBF5, ABF3 abscisic acid responsive elements-binding factor 3 0.06 OrthoFinder output from all 47 species
Ala_g02280 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32117 ABF1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03487 ABF1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05469 AREB2, ABF4 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21976 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02975 DPBF3, AREB3 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26756 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32144 ABF1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009485001 ABF2, ATAREB1, AREB1 RNA biosynthesis.transcriptional activation.bZIP... 0.04 OrthoFinder output from all 47 species
GSVIVT01034540001 GBF4 RNA biosynthesis.transcriptional activation.bZIP... 0.06 OrthoFinder output from all 47 species
Gb_16168 ABF2, ATAREB1, AREB1 transcription factor (bZIP) 0.07 OrthoFinder output from all 47 species
Gb_38174 ABF2, ATAREB1, AREB1 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64730.1 GBF4, LOC_Os01g64730 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
LOC_Os02g52780.1 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Len_g03850 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Len_g10696 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18511 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g46528 ABF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_18107g0010 ABF2, ATAREB1, AREB1 transcription factor (bZIP) 0.05 OrthoFinder output from all 47 species
Nbi_g07043 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g08399 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02561 DPBF5, ABF3 bZIP class-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g43939 DPBF3, AREB3 bZIP class-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12389 ABF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g104650.3.1 GBF4, Solyc01g104650 transcription factor (bZIP) 0.06 OrthoFinder output from all 47 species
Solyc04g078840.3.1 ABF2, ATAREB1,... transcription factor (bZIP) 0.06 OrthoFinder output from all 47 species
Solyc09g009490.4.1 ABI5, GIA1,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e015956_P002 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR004827 bZIP 468 520
No external refs found!