Zm00001e004226_P001 (ATHB1, ATHB-1, HAT5,...)

Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1, Zm00001e004226

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e004226_P001
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
Aev_g25617	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.04	OrthoFinder output from all 47 species
Als_g04242	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aob_g11711	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene35463.t1	ATHB3, HB-3,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Aspi01Gene68244.t1	ATHB3, HB-3,...	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Dac_g34453	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09808	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Ehy_g10606	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g23915	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
LOC_Os08g37580.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Len_g10023	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g45930	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g51073	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g17503	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
MA_130615g0020	HB6, ATHB6	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
MA_3951g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Mp3g02320.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Ore_g15312	ATHB16, HB16, ATHB-16	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g16236	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Pir_g12448	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Pir_g24934	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ppi_g63283	No alias	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Smo19476	ATHB3, HB-3, ATHB-3, HAT7	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Solyc03g034120.3.1	ATHB40, HB40,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Tin_g07509	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	77	130
IPR003106	Leu_zip_homeo	132	174

External Links

No external refs found!

Zm00001e004226_P001 (ATHB1, ATHB-1, HAT5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation