1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e004353_P001

Zm00001e004353_P001 (CB5-E, ATCB5-E,...)


Aliases : CB5-E, ATCB5-E, ATB5-A, B5 #2, Zm00001e004353

Description : component Cyt-b5 of CER1-CER3 alkane-forming complex


Gene families : OG0000285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004353_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g020264 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Adi_g042653 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Adi_g127395 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Als_g44478 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Cba_g69187 B5 #4, ATCB5-B, CB5-B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G095800.1 B5 #4, ATCB5-B,... electron shuttle component *(Cyt-b5) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
GSVIVT01038613001 CB5-E, ATCB5-E,... Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
Len_g54605 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Nbi_g06451 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Nbi_g28757 B5 #5, CB5LP, ATCB5LP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33843 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Pnu_g12566 B5 #3, CB5-D,... electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Sam_g10322 No alias electron shuttle component *(Cyt-b5) of CER1-CER3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001199 Cyt_B5-like_heme/steroid-bd 11 80
No external refs found!