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  5. Zm00001e004370_P001

Zm00001e004370_P001 (Zm00001e004370)


Aliases : Zm00001e004370

Description : UPF0496 protein 4 OS=Oryza sativa subsp. japonica (sp|q337c0|u496d_orysj : 456.0)


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004370_P001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT1G63930 ROH1 from the Czech 'roh' meaning 'corner' 0.04 OrthoFinder output from all 47 species
Adi_g009056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17662 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G030100.1 BPS1, Ceric.22G030100 not classified & original description: pacid=50615453... 0.02 OrthoFinder output from all 47 species
Ceric.31G018000.1 BPS1, Ceric.31G018000 not classified & original description: pacid=50574511... 0.04 OrthoFinder output from all 47 species
Dcu_g02755 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02804 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g22435 BPS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06674 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g59140.1 LOC_Os04g59140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g48320 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g16018 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10143 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g081520.1.1 ROH1, Solyc08g081520 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g18331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 174 289
No external refs found!