Zm00001e004470_P001 (Zm00001e004470)


Aliases : Zm00001e004470

Description : catalytic component GID2 of ubiquitin protein ligase complex


Gene families : OG0002380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002380_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004470_P001

Target Alias Description ECC score Gene Family Method Actions
Als_g00897 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.02 OrthoFinder output from all 47 species
Aspi01Gene25721.t1 Aspi01Gene25721 E3 ubiquitin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species
Cba_g03104 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.04 OrthoFinder output from all 47 species
Ceric.19G006900.1 Ceric.19G006900 E3 ubiquitin ligase component *(GID2) of GID... 0.02 OrthoFinder output from all 47 species
GSVIVT01038533001 No alias Protein RMD5 homolog OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os06g38940.2 LOC_Os06g38940 catalytic component GID2 of ubiquitin protein ligase complex 0.03 OrthoFinder output from all 47 species
Lfl_g14730 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.04 OrthoFinder output from all 47 species
Nbi_g02148 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species
Pir_g10158 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species
Pnu_g10988 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.02 OrthoFinder output from all 47 species
Solyc02g091720.2.1 Solyc02g091720 catalytic component GID2 of ubiquitin protein ligase complex 0.02 OrthoFinder output from all 47 species
Tin_g02574 No alias E3 ubiquiTin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR024964 CTLH/CRA 151 295
IPR027370 Znf-RING_euk 333 374
No external refs found!