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  5. Zm00001e005020_P003

Zm00001e005020_P003 (ATHEXP BETA 1.4,...)


Aliases : ATHEXP BETA 1.4, ATEXPB2, EXPB2, Zm00001e005020

Description : Expansin-B12 OS=Oryza sativa subsp. japonica (sp|q10g40|exb12_orysj : 315.0)


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005020_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00266410 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-type expansin 0.02 OrthoFinder output from all 47 species
AT3G45960 ATEXLA3, EXPL3,... expansin-like A3 0.06 OrthoFinder output from all 47 species
AT4G38210 ATEXPA20,... expansin A20 0.03 OrthoFinder output from all 47 species
AT5G02260 EXP9, EXPA9,... expansin A9 0.03 OrthoFinder output from all 47 species
Als_g11063 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20979 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20874 ATEXPA4, ATEXP4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21879 ATEXPA10,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21880 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21881 ATEXPA11, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36017 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g44449 ATEXPA10,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52233.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03639 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g08546 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g56176 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.01G000500.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G039900.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g13325 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11792 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g51040.1 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os04g49410.1 ATEXP13,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_104065g0020 ATEXPA3, EXP3,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_10429288g0020 EXPA2, ATHEXP... Expansin-A2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp3g09650.1 EXPA6, ATEXP6,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp3g09750.1 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Msp_g44169 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15939 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g005560.4.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Spa_g50328 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e037877_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 192 276
IPR009009 RlpA-like_DPBB 99 180
No external refs found!