Aliases : KAN4, ATS, Zm00001e005097
Description : G2-like GARP transcription factor
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00013790 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00190540 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00151950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00048p00125480 | KAN2,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00048p00192390 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00095480 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.05 | OrthoFinder output from all 47 species | |
| AT2G38300 | No alias | myb-like HTH transcriptional regulator family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G40260 | No alias | Homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G04605 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03847 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g08301 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04353 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04915 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07061 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15748 | No alias | transcription factor *(CLAUSA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g32729 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g47747 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g17750 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g38602 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33756.t1 | Aspi01Gene33756 | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene35964.t1 | Aspi01Gene35964 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene42938.t1 | Aspi01Gene42938 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene55088.t1 | Aspi01Gene55088 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene70044.t1 | Aspi01Gene70044 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023545 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0124.g048483 | No alias | transcription factor *(CLAUSA) & original description: CDS=1-1350 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03918 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15907 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19840 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g21846 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g24534 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g43219 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G027900.1 | Ceric.21G027900 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G076700.1 | Ceric.21G076700 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g36923 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g16600 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g48326 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08285 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000606001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032776001 | No alias | Putative Myb family transcription factor At1g14600... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g03760.1 | LOC_Os03g03760 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g56990.1 | LOC_Os04g56990 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g06370.1 | KAN2, LOC_Os08g06370 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g01480.1 | LOC_Os11g01480 | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g01490.1 | LOC_Os12g01490 | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
| MA_138039g0010 | KAN2 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| MA_15920g0010 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| MA_28188g0010 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g31008 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03481 | KAN3 | KANADI-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g17637 | No alias | transcription factor *(CLAUSA) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g19105 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30067 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g37615 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43901 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11277 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g29343 | KAN2 | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g13922 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22623 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05575 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g30894 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010896 | No alias | transcription factor *(CLAUSA) & original description: CDS=80-784 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0042.g012676 | No alias | GARP subgroup HHO transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo417629 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g006150.2.1 | Solyc03g006150 | Putative Myb family transcription factor At1g14600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g055940.3.1 | PHL1, Solyc05g055940 | PHR1 transcription factor involved in proline synthesis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15533 | No alias | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e004125_P001 | Zm00001e004125 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e022454_P001 | Zm00001e022454 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037731_P001 | APL, WDY, Zm00001e037731 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039024_P001 | Zm00001e039024 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 112 | 163 |
| No external refs found! |
