Zm00001e005208_P001 (TUB8, Zm00001e005208)

Aliases : TUB8, Zm00001e005208

Description : component beta-Tubulin of alpha-beta-Tubulin heterodimer

Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e005208_P001
Cluster	HCCA: Cluster_161

Target	Alias	Description	ECC score	Gene Family Method
AT5G62690	TUB2	tubulin beta chain 2	0.04	OrthoFinder output from all 47 species
AT5G62700	TUB3	tubulin beta chain 3	0.04	OrthoFinder output from all 47 species
Ceric.04G088300.1	TUB8, Ceric.04G088300	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Dcu_g07559	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Gb_02421	TUB8	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Gb_18746	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Msp_g41363	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000584	TUB2	not classified & original description: CDS=76-996	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022789	TUB6	not classified & original description: CDS=157-1053	0.02	OrthoFinder output from all 47 species
Sam_g09016	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Sam_g25916	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Solyc06g005910.4.1	TUB8, Solyc06g005910	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	261	382
IPR003008	Tubulin_FtsZ_GTPase	3	211

External Links

No external refs found!