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  5. Zm00001e005469_P003

Zm00001e005469_P003 (Zm00001e005469)


Aliases : Zm00001e005469

Description : Binding partner of ACD11 1 OS=Arabidopsis thaliana (sp|q9lfd5|bpa1_arath : 199.0)


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005469_P003

Target Alias Description ECC score Gene Family Method Actions
AT5G32450 No alias RNA binding (RRM/RBD/RNP motifs) family protein 0.05 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14819 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g22163 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene50706.t1 Aspi01Gene50706 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0130.g049026 No alias not classified & original description: CDS=251-1009 0.04 OrthoFinder output from all 47 species
Ehy_g02086 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g11503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011624001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g54870.1 LOC_Os04g54870 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_8292402g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g01032 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g11660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e036683_P001 Zm00001e036683 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 7 69
No external refs found!