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  5. Zm00001e006042_P001

Zm00001e006042_P001 (Zm00001e006042)


Aliases : Zm00001e006042

Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006042_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00066610 SPT,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT1G10120 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G02590 UNE12 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g088431 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aev_g07851 LRL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33936 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14421 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04431.t1 PIF3, POC1,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60934.t1 PIF3, POC1,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01768 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Cre14.g620850 BIM2 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Dde_g01271 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08372 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_28961g0020 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Nbi_g09354 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pnu_g13442 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33766 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pp3c17_17000V3.1 LRL1, Pp3c17_17000 LJRHL1-like 1 0.01 OrthoFinder output from all 47 species
Spa_g50491 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031023 microtubule organizing center organization IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 136 183
No external refs found!