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  5. Zm00001e006941_P001

Zm00001e006941_P001 (AGO2, Zm00001e006941)


Aliases : AGO2, Zm00001e006941

Description : siRNA-binding factor (AGO2) of non-canonical RdDM pathway


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Zm00001e006941_P001

Target Alias Description ECC score Gene Family Method Actions
Ala_g33064 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
MA_71066g0010 AGO4, OCP11 Protein argonaute 4B OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Nbi_g07722 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species
Ppi_g18600 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.01 OrthoFinder output from all 47 species
Ppi_g48869 AGO5 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032474 Argonaute_N 213 337
IPR003100 PAZ_dom 412 527
IPR014811 ArgoL1 349 395
IPR003165 Piwi 706 999
IPR032472 ArgoL2 538 584
No external refs found!