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  5. Zm00001e007033_P001

Zm00001e007033_P001 (VLN4, ATVLN4, Zm00001e007033)


Aliases : VLN4, ATVLN4, Zm00001e007033

Description : villin actin-crosslinking factor


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007033_P001
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AT5G57320 VLN5 villin, putative 0.04 OrthoFinder output from all 47 species
Aev_g02570 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23196 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09180 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30356.t2 VLN4, ATVLN4,... villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25933 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G079800.1 ATVLN2, VLN2,... villin actin-crosslinking factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g39503 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04950 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029237001 VLN4, ATVLN4 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Gb_25295 VLN4, ATVLN4 villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g51440.1 VLN4, ATVLN4,... villin actin-crosslinking factor 0.06 OrthoFinder output from all 47 species
Lfl_g16223 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436386g0010 ATVLN2, VLN2 villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
MA_61502g0010 VLN4, ATVLN4 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9118625g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g09750.1 ATVLN2, VLN2 villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Nbi_g12930 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12233 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27621 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017480 VLN4, ATVLN4 villin actin-crosslinking factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc10g079400.3.1 ATVLN2, VLN2,... villin actin-crosslinking factor 0.09 OrthoFinder output from all 47 species
Spa_g09598 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47063 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028314_P001 ATVLN2, VLN2,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004512 inositol-3-phosphate synthase activity IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006021 inositol biosynthetic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 28 111
IPR007123 Gelsolin-like_dom 152 219
IPR007123 Gelsolin-like_dom 641 715
IPR007123 Gelsolin-like_dom 274 336
IPR003128 Villin_headpiece 911 946
No external refs found!