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  5. Zm00001e009073_P001

Zm00001e009073_P001 (Zm00001e009073)


Aliases : Zm00001e009073

Description : no hits & (original description: none)


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009073_P001
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00251380 evm_27.TU.AmTr_v1... Protein BPS1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00052950 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G01550 BPS1 Protein of unknown function (DUF793) 0.06 OrthoFinder output from all 47 species
AT1G18740 No alias Protein of unknown function (DUF793) 0.06 OrthoFinder output from all 47 species
AT1G74450 No alias Protein of unknown function (DUF793) 0.04 OrthoFinder output from all 47 species
AT4G01360 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g021993 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057468 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086085 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11773 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g10598 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54448 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01622 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17662 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36638 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01342.t1 BPS1, Aspi01Gene01342 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28412.t1 BPS1, Aspi01Gene28412 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35201.t1 BPS1, Aspi01Gene35201 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58350.t1 Aspi01Gene58350 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G039400.1 Ceric.04G039400 not classified & original description: pacid=50630851... 0.03 OrthoFinder output from all 47 species
Ceric.22G029200.1 Ceric.22G029200 not classified & original description: pacid=50614228... 0.03 OrthoFinder output from all 47 species
Ceric.22G029500.1 Ceric.22G029500 not classified & original description: pacid=50614434... 0.05 OrthoFinder output from all 47 species
Ceric.22G031800.1 Ceric.22G031800 not classified & original description: pacid=50614819... 0.02 OrthoFinder output from all 47 species
Ceric.22G032300.1 Ceric.22G032300 not classified & original description: pacid=50615347... 0.04 OrthoFinder output from all 47 species
Ceric.25G006400.1 BPS1, Ceric.25G006400 not classified & original description: pacid=50594262... 0.03 OrthoFinder output from all 47 species
Ceric.35G009900.1 Ceric.35G009900 not classified & original description: pacid=50581013... 0.03 OrthoFinder output from all 47 species
Dac_g04612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13361 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g16880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02755 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22435 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019411001 ROH1 No description available 0.05 OrthoFinder output from all 47 species
Gb_06674 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_18309 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_18311 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_22841 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g01930.1 ROH1, LOC_Os02g01930 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g06440.1 LOC_Os11g06440 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os12g06780.1 LOC_Os12g06780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g16261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17376 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_123240g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_126973g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_130577g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_16561g0010 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_52232g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_85744g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g11031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01034 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06670 ROH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21991 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005897 No alias not classified & original description: CDS=1-1284 0.02 OrthoFinder output from all 47 species
Smo422297 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc01g094950.3.1 Solyc01g094950 Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g07215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53529 BPS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03876 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e041995_P001 Zm00001e041995 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 17 406
No external refs found!