Aliases : UBQ11, Zm00001e009126
Description : Polyubiquitin (Fragment) OS=Acetabularia peniculus (sp|p42739|ubiqp_acepe : 183.0)
Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G53930 | No alias | Ubiquitin-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g023730 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g31283 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g58040 | UBQ11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g58521 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g14593 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g58963 | UBQ14 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08633 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g28034 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34959 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g79067 | UBQ11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G071800.1 | UBQ11, Ceric.12G071800 | UBQ ubiquitin-fold protein & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g22490.1 | UBQ6, LOC_Os01g22490 | component RPS27a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g45400.1 | RUB1, ATRUB1,... | ubiquitin-fold protein (UBQ). ubiquitin-fold protein (RUB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g53620.1 | UBQ4, LOC_Os04g53620 | ubiquitin-fold protein (UBQ) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g42424.1 | UBQ4, LOC_Os05g42424 | ubiquitin-fold protein (UBQ) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g08760.1 | LOC_Os08g08760 | Polyubiquitin 3 OS=Oryza sativa subsp. japonica... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g39590.1 | LOC_Os10g39590 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10245 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g16040.1 | No alias | Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02936 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c24_430V3.1 | Pp3c24_430 | ubiquitin extension protein 1 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c4_11430V3.1 | UBQ14, Pp3c4_11430 | polyubiquitin 10 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g04808 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07360 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07364 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g44136 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo101548 | No alias | Polyubiquitin 3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Smo271198 | UBQ4 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030436_P001 | RUB1, ATRUB1,... | ubiquitin-fold protein (UBQ). ubiquitin-fold protein (RUB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| No external refs found! |
