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  5. Zm00001e010016_P002

Zm00001e010016_P002 (Zm00001e010016)


Aliases : Zm00001e010016

Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010016_P002
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00137860 BEE3,... External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.02 OrthoFinder output from all 47 species
Ala_g20444 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g17417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28194 LRL1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29816 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35502 HEC2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044857 SPT bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Cba_g57120 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.16G013800.1 RHD6, Ceric.16G013800 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.16G026700.1 Ceric.16G026700 regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Dac_g16940 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ehy_g03657 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022111001 SPT RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01023783001 CIB1 External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
Gb_06182 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Gb_13867 PIF3, POC1, PAP3 transcription factor (bHLH). PIF red/far-red light... 0.04 OrthoFinder output from all 47 species
LOC_Os08g01700.1 HEC3, LOC_Os08g01700 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Len_g36428 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09246 HEC2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10731 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16867 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01002 LRL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32514 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03791 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013831 SPT bHLH-type transcription factor & original description: CDS=1-1485 0.02 OrthoFinder output from all 47 species
Sam_g14482 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48598 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13574 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47496 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011866_P002 UNE12, Zm00001e011866 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e034146_P001 LRL1, Zm00001e034146 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e035219_P001 Zm00001e035219 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 265 313
No external refs found!