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  5. Zm00001e010253_P001

Zm00001e010253_P001 (NTMC2T1.2, SYTB,...)


Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB, Zm00001e010253

Description : endoplasmic reticulum-plasma membrane tethering protein (SYTa/b/c)


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010253_P001

Target Alias Description ECC score Gene Family Method Actions
Aob_g02070 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Aop_g02898 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G077600.1 NTMC2TYPE4,... not classified & original description: pacid=50624659... 0.02 OrthoFinder output from all 47 species
Cre01.g044600 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g08065 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021442001 NTMC2T1.3, SYT3,... Synaptotagmin-3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01025699001 NTMC2T1.3, SYT3,... Synaptotagmin-3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g05539 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10280179g0010 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Mp6g02520.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Ppi_g13422 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28749 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g111520.3.1 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.05 OrthoFinder output from all 47 species
Spa_g40077 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12221 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 67 248
IPR000008 C2_dom 260 358
IPR000008 C2_dom 420 522
No external refs found!