Zm00001e010918_P001 (UBP24, Zm00001e010918)

Aliases : UBP24, Zm00001e010918

Description : deubiquitinase (UBP24)

Gene families : OG0005424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005424_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e010918_P001

Target	Alias	Description	ECC score	Gene Family Method
Aev_g44389	UBP24	deubiquitinase *(UBP24) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene68604.t1	UBP24, Aspi01Gene68604	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.28G047700.1	UBP24, Ceric.28G047700	deubiquitinase *(UBP24) & original description:...	0.02	OrthoFinder output from all 47 species
Gb_13082	UBP24	deubiquitinase (UBP24)	0.02	OrthoFinder output from all 47 species
MA_6411g0010	UBP24	Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp3g13650.1	UBP24	deubiquitinase (UBP24)	0.02	OrthoFinder output from all 47 species
Ore_g02425	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g15236	No alias	deubiquitinase *(UBP24) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc11g065210.3.1	UBP24, Solyc11g065210	deubiquitinase (UBP24)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	202	549

External Links

No external refs found!