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  5. Zm00001e011287_P001

Zm00001e011287_P001 (ASK2, SKP1B, Zm00001e011287)


Aliases : ASK2, SKP1B, Zm00001e011287

Description : target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes


Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011287_P001

Target Alias Description ECC score Gene Family Method Actions
AT2G03170 ASK14, SK14 SKP1-like 14 0.03 OrthoFinder output from all 47 species
AT4G34470 SK12, ASK12 SKP1-like 12 0.02 OrthoFinder output from all 47 species
Cba_g38923 No alias ASK-type linker component of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Ceric.20G071500.1 ASK2, SKP1B,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
LOC_Os09g10200.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 5 64
IPR016072 Skp1_comp_dimer 113 160
No external refs found!