1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e011516_P001

Zm00001e011516_P001 (TCP2, Zm00001e011516)


Aliases : TCP2, Zm00001e011516

Description : transcription factor (TCP)


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011516_P001
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158020 TCP4, MEE35,... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AT2G31070 TCP10 TCP domain protein 10 0.04 OrthoFinder output from all 47 species
AT3G15030 TCP4, MEE35 TCP family transcription factor 4 0.04 OrthoFinder output from all 47 species
AT4G18390 TCP2 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0.03 OrthoFinder output from all 47 species
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.09 OrthoFinder output from all 47 species
Adi_g101936 TCP10 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27741.t1 TCP2, Aspi01Gene27741 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43428.t1 TCP17, Aspi01Gene43428 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55173.t1 TCP2, Aspi01Gene55173 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0168.g054602 TCP3 TCP-type transcription factor & original description: CDS=18-1559 0.03 OrthoFinder output from all 47 species
Cba_g22010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37204 TCP2 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04803 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008234001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
GSVIVT01014236001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
GSVIVT01036449001 TCP1 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11550.1 TCP4, MEE35,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os01g55750.1 TCP5, LOC_Os01g55750 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g43760.1 TCP5, LOC_Os05g43760 transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
LOC_Os07g05720.1 TCP2, LOC_Os07g05720 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Msp_g48155 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10533 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45194 TCP2 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g006980.1.1 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc05g009900.3.1 TCP12, BRC2,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc06g069240.2.1 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Spa_g55051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009811_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.08 OrthoFinder output from all 47 species
Zm00001e027401_P002 TCP5, Zm00001e027401 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e034097_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 63 197
No external refs found!