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  5. Zm00001e011960_P001

Zm00001e011960_P001 (HCF164, Zm00001e011960)


Aliases : HCF164, Zm00001e011960

Description : HCF164 protein involved in cytochrome b6/f complex assembly


Gene families : OG0006010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011960_P001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00183340 HCF164,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.08 OrthoFinder output from all 47 species
AT4G37200 HCF164 Thioredoxin superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g025987 HCF164 protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Ala_g01048 HCF164 protein involved in cytochrome b6/f complex assembly... 0.08 OrthoFinder output from all 47 species
Als_g11520 HCF164 protein involved in cytochrome b6/f complex assembly... 0.07 OrthoFinder output from all 47 species
Aob_g01003 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Aop_g12552 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48086.t1 HCF164, Aspi01Gene48086 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0092.g043076 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Ceric.29G044400.1 HCF164, Ceric.29G044400 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001264.18 HCF164 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Dac_g03170 HCF164 protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Dcu_g47105 HCF164 protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Dde_g01274 HCF164 protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Ehy_g06408 HCF164 protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Ehy_g23323 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Gb_14739 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.04 OrthoFinder output from all 47 species
LOC_Os03g55820.1 HCF164, LOC_Os03g55820 HCF164 protein involved in cytochrome b6/f complex assembly 0.05 OrthoFinder output from all 47 species
Len_g42474 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Lfl_g02690 HCF164 protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
MA_10429518g0010 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.06 OrthoFinder output from all 47 species
Mp4g10810.1 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.02 OrthoFinder output from all 47 species
Nbi_g12738 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Ore_g25849 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Pir_g14034 HCF164 protein involved in cytochrome b6/f complex assembly... 0.08 OrthoFinder output from all 47 species
Sam_g28646 No alias protein involved in cytochrome b6/f complex assembly... 0.08 OrthoFinder output from all 47 species
Solyc07g064940.3.1 HCF164, Solyc07g064940 HCF164 protein involved in cytochrome b6/f complex assembly 0.03 OrthoFinder output from all 47 species
Spa_g17264 HCF164 protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 128 219
No external refs found!