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  5. Zm00001e012029_P003

Zm00001e012029_P003 (ATSPO11-1, Zm00001e012029)


Aliases : ATSPO11-1, Zm00001e012029

Description : component a (SPO11) of meiotic topoisomerase-VI complex


Gene families : OG0001338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012029_P003

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020902.41 BIN5, RHL2 DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre02.g084800 BIN5, RHL2 DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g17060 BIN5, RHL2 component *(TOP6A) of somatic DNA topoisomerase VI... 0.03 OrthoFinder output from all 47 species
LOC_Os03g54091.1 ATSPO11-1, LOC_Os03g54091 component a (SPO11) of meiotic topoisomerase-VI complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0006259 DNA metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013049 Spo11/TopoVI_A_N 140 200
No external refs found!