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  5. Zm00001e012194_P001

Zm00001e012194_P001 (Zm00001e012194)


Aliases : Zm00001e012194

Description : transcription factor (BBX-CO)


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012194_P001
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00156240 CIA2,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.06 OrthoFinder output from all 47 species
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.03 OrthoFinder output from all 47 species
AT1G49130 No alias B-box type zinc finger protein with CCT domain 0.03 OrthoFinder output from all 47 species
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.03 OrthoFinder output from all 47 species
Adi_g075719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099497 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21583 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09487 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08686 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04399 No alias CMF transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g13738 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30657 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20729 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0076.g037937 No alias CMF transcription factor & original description: CDS=1-2013 0.03 OrthoFinder output from all 47 species
Cba_g26917 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cre15.g635100 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g09127 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20875 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08483 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
LOC_Os03g50310.1 LOC_Os03g50310 transcription factor (BBX-CO) 0.07 OrthoFinder output from all 47 species
Len_g23704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31511 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06124 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06152 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10192193g0020 No alias transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
MA_10428386g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g19670.1 No alias transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Msp_g37830 No alias CMF transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g14113 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16447 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14853 No alias CMF transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g15539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19039 No alias BBX class-III transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18432 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13174 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17788 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007602 No alias not classified & original description: CDS=193-1710 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023452 No alias BBX class-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g15685 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g093590.3.1 Solyc02g093590 transcription factor (BBX-CO) 0.04 OrthoFinder output from all 47 species
Spa_g04603 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52289 No alias BBX class-III transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e030952_P002 Zm00001e030952 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 17 59
IPR010402 CCT_domain 327 369
No external refs found!