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  5. Zm00001e012402_P001

Zm00001e012402_P001 (NCED3, SIS7, STO1,...)


Aliases : NCED3, SIS7, STO1, ATNCED3, Zm00001e012402

Description : neoxanthin cleavage protein


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012402_P001
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00194530 NCED3, SIS7,... Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00035370 NCED3, SIS7,... No description available 0.03 OrthoFinder output from all 47 species
AT1G30100 ATNCED5, NCED5 nine-cis-epoxycarotenoid dioxygenase 5 0.03 OrthoFinder output from all 47 species
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.05 OrthoFinder output from all 47 species
Adi_g060963 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Adi_g126851 ATCCD1, CCD1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05406 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Ala_g16595 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ala_g26901 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Als_g29909 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aob_g21663 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aop_g04398 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Aop_g08513 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aop_g12882 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aop_g28984 ATNCED9, NCED9 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g36988 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Azfi_s0010.g012346 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Azfi_s0114.g046017 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Cba_g02022 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Cba_g27810 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Cba_g60638 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Ceric.03G078800.1 NCED2, ATNCED2,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Ceric.03G078900.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ceric.06G077400.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ceric.23G042200.1 CCD4, NCED4,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Ceric.23G048000.1 ATNCED5, NCED5,... not classified & original description: pacid=50610607... 0.04 OrthoFinder output from all 47 species
Ceric.35G030200.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.07 OrthoFinder output from all 47 species
Ceric.36G058200.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Dac_g07038 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dac_g12313 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dac_g28064 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dac_g31305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39217 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dcu_g11056 ATNCED5, NCED5 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Dcu_g16527 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.08 OrthoFinder output from all 47 species
Dcu_g16938 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dcu_g39142 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dde_g10274 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dde_g17123 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dde_g23722 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g22300 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
GSVIVT01029057001 NCED6, ATNCED6 Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.05 OrthoFinder output from all 47 species
GSVIVT01032110001 ATCCD1, CCD1,... Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
GSVIVT01038080001 NCED3, SIS7,... Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.08 OrthoFinder output from all 47 species
Gb_04986 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.04 OrthoFinder output from all 47 species
Gb_07367 NCED3, SIS7,... carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.03 OrthoFinder output from all 47 species
Gb_19071 NCED3, SIS7,... carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.08 OrthoFinder output from all 47 species
LOC_Os03g44380.1 NCED3, SIS7,... neoxanthin cleavage protein 0.12 OrthoFinder output from all 47 species
LOC_Os07g05940.1 ATNCED9, NCED9,... neoxanthin cleavage protein 0.13 OrthoFinder output from all 47 species
Len_g38712 NCED3, SIS7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58979 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
MA_10428505g0020 NCED3, SIS7,... neoxanthin cleavage protein 0.02 OrthoFinder output from all 47 species
Msp_g13081 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Msp_g15918 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Msp_g21278 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Msp_g28940 CCD4, NCED4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14297 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Nbi_g20580 ATCCD1, CCD1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21905 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.08 OrthoFinder output from all 47 species
Nbi_g29519 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ore_g43794 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Pir_g11311 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Ppi_g11542 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ppi_g14340 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Ppi_g15055 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Ppi_g32214 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ppi_g43883 CCD4, NCED4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003813 No alias not classified & original description: CDS=1-225 0.03 OrthoFinder output from all 47 species
Sam_g30410 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Solyc05g053530.1.1 NCED6, ATNCED6,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Solyc08g016720.1.1 NCED3, SIS7,... neoxanthin cleavage protein 0.02 OrthoFinder output from all 47 species
Spa_g04370 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Spa_g10177 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Spa_g15240 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Tin_g13052 NCED3, SIS7,... EC_1.13 oxidoreductase acTing on single donor with... 0.02 OrthoFinder output from all 47 species
Tin_g32824 NCED3, SIS7,... EC_1.13 oxidoreductase acTing on single donor with... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 125 592
No external refs found!