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  5. Zm00001e012405_P001

Zm00001e012405_P001 (ATTRB1, TRB1, Zm00001e012405)


Aliases : ATTRB1, TRB1, Zm00001e012405

Description : PRC2-recruiting factor (TRB). transcription factor (MYB-related)


Gene families : OG0000994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000994_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012405_P001
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Aev_g19253 ATTRB1, TRB1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os01g40670.1 ATTRB1, TRB1,... PRC2-recruiting factor (TRB). transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Msp_g00397 ATTRB1, TRB1 PRC2-recruiting factor (TRB) of PRC2 histone methylation... 0.04 OrthoFinder output from all 47 species
Nbi_g12245 ATTRB1, TRB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11264 ATTRB1, TRB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 5 56
IPR005818 Histone_H1/H5_H15 126 182
No external refs found!