Zm00001e012628_P001 (Zm00001e012628)

Aliases : Zm00001e012628

Description : E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum (sp|p0ch30|ring1_goshi : 167.0)

Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e012628_P001

Target	Alias	Description	ECC score	Gene Family Method
Ceric.16G066200.1	Ceric.16G066200	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
Dcu_g04768	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Dcu_g24136	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Gb_41745	No alias	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os10g34590.1	LOC_Os10g34590	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum...	0.11	OrthoFinder output from all 47 species
Lfl_g10238	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Lfl_g19818	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g30731	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_126084g0010	RHC2A	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum...	0.04	OrthoFinder output from all 47 species
Ppi_g55439	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g05859	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR039525	RNF126-like_zinc-ribbon	16	50
IPR001841	Znf_RING	247	289

External Links

No external refs found!