Zm00001e012830_P001 (Zm00001e012830)


Aliases : Zm00001e012830

Description : F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana (sp|q8l736|ski11_arath : 441.0)


Gene families : OG0000497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000497_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012830_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00255050 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00013p00223970 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G14330 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G02870 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g021774 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g18445 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Als_g26601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40179 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dac_g00997 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dde_g06004 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ehy_g06805 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g15525 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01008033001 No alias F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01020023001 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_41312 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g51350.1 LOC_Os02g51350 F-box/kelch-repeat protein At1g74510 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_122694g0010 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g08115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010089 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g10193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo79476 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g005670.3.1 Solyc04g005670 F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc11g069320.1.1 Solyc11g069320 F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g04654 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Tin_g07174 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e023895_P005 Zm00001e023895 F-box/kelch-repeat protein At1g74510 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 282 328
IPR006652 Kelch_1 234 280
No external refs found!