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  5. Zm00001e012980_P001

Zm00001e012980_P001 (PMIT1, NRAMP1,...)


Aliases : PMIT1, NRAMP1, ATNRAMP1, Zm00001e012980

Description : metal cation transporter (NRAMP)


Gene families : OG0000603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012980_P001
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273040 ATNRAMP2,... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Adi_g019272 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059005 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059006 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059631 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g10005 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26408 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g30659 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007921 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046115 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original... 0.02 OrthoFinder output from all 47 species
Cba_g05824 ATNRAMP3, NRAMP3 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71787 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G035200.1 PMIT1, NRAMP1,... metal cation transporter *(NRAMP) & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G048600.1 PMIT1, NRAMP1,... metal cation transporter *(NRAMP) & original... 0.04 OrthoFinder output from all 47 species
Ceric.19G035300.1 ATNRAMP4,... metal cation transporter *(NRAMP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.39G032100.1 ATNRAMP4,... metal cation transporter *(NRAMP) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11760 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17565 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33836 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04787 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008829001 PMIT1, NRAMP1, ATNRAMP1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01034237001 PMIT1, NRAMP1, ATNRAMP1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Gb_30457 ATNRAMP3, NRAMP3 metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
Gb_39414 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g03900.1 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
LOC_Os03g11010.1 ATNRAMP2,... metal cation transporter (NRAMP) 0.07 OrthoFinder output from all 47 species
LOC_Os07g15370.1 NRAMP6,... metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
Len_g29106 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31444 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430859g0010 NRAMP6, ATNRAMP6 metal cation transporter (NRAMP) 0.06 OrthoFinder output from all 47 species
MA_884894g0010 NRAMP6, ATNRAMP6 Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Mp4g10130.1 NRAMP6, ATNRAMP6 metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species
Msp_g11930 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26715 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g33813 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g29151 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g14876 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28944 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007080 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g20656 No alias metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo417169 ATNRAMP4, NRAMP4 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Solyc11g018530.2.1 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.05 OrthoFinder output from all 47 species
Spa_g01161 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001046 NRAMP_fam 144 506
No external refs found!