Aliases : AtRCD1, RCD1, ATP8, CEO1, CEO, Zm00001e012999
Description : Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana (sp|q8ry59|rcd1_arath : 186.0)
Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e012999_P001 | |
| Cluster | HCCA: Cluster_103 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G32230 | AtRCD1, RCD1,... | WWE protein-protein interaction domain protein family | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g018771 | SRO1 | organellar-signalling mediator *(RCD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g056817 | AtRCD1, RCD1,... | organellar-signalling mediator *(RCD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g065990 | SRO1 | organellar-signalling mediator *(RCD1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g085807 | SRO2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g087899 | AtRCD1, RCD1,... | organellar-signalling mediator *(RCD1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04667 | SRO1 | organellar-signalling mediator *(RCD1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g08224 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29470 | SRO1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G015900.1 | SRO3, Ceric.03G015900 | organellar-signalling mediator *(RCD1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G059600.1 | AtRCD1, RCD1,... | not classified & original description: pacid=50625179... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g22889 | AtRCD1, RCD1,... | organellar-signalling mediator *(RCD1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01013086001 | AtRCD1, RCD1,... | Inactive poly [ADP-ribose] polymerase RCD1... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01013090001 | AtRCD1, RCD1,... | Inactive poly [ADP-ribose] polymerase RCD1... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g42710.1 | AtRCD1, RCD1,... | Inactive poly [ADP-ribose] polymerase RCD1... | 0.12 | OrthoFinder output from all 47 species | |
| Lfl_g07371 | AtRCD1, RCD1,... | organellar-signalling mediator *(RCD1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10426389g0010 | No alias | Inactive poly [ADP-ribose] polymerase RCD1... | 0.02 | OrthoFinder output from all 47 species | |
| MA_5033617g0010 | SRO1 | Probable inactive poly [ADP-ribose] polymerase SRO1... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15630 | SRO5 | organellar-signalling mediator *(RCD1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g34783 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g18220 | AtRCD1, RCD1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g36020 | AtRCD1, RCD1,... | organellar-signalling mediator *(RCD1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29371 | No alias | organellar-signalling mediator *(RCD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g076420.3.1 | AtRCD1, RCD1,... | Inactive poly [ADP-ribose] polymerase RCD1... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g07052 | AtRCD1, RCD1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08708 | AtRCD1, RCD1,... | organellar-signalling mediator *(RCD1) & original... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0008272 | sulfate transport | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | HCCA |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015116 | sulfate transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0019902 | phosphatase binding | IEP | HCCA |
| MF | GO:0019903 | protein phosphatase binding | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | HCCA |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072348 | sulfur compound transport | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| MF | GO:1901682 | sulfur compound transmembrane transporter activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022003 | RST | 508 | 572 |
| No external refs found! |
