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  5. Zm00001e013329_P001

Zm00001e013329_P001 (NFD2, HMG BETA 1,...)


Aliases : NFD2, HMG BETA 1, HMGB2, NFD02, Zm00001e013329

Description : DNA-binding protein MNB1B OS=Zea mays (sp|p27347|mnb1b_maize : 95.9)


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013329_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G51880 NFD1, HMGB1 high mobility group B1 0.01 OrthoFinder output from all 47 species
Aop_g26024 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g007563 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Cba_g23108 ATHMG, HMG, SSRP1, NFD not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g47564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026642001 NFD2, HMG BETA... HMG1/2-like protein OS=Glycine max 0.04 OrthoFinder output from all 47 species
Gb_07912 NFD2, HMG BETA... High mobility group B protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os04g47690.1 NFD03, HMGB3,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g04502 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Len_g25840 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g05824 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012915 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
Sam_g13956 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44851 NFD03, HMGB3, NFD3 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g53927 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 41 110
No external refs found!