Zm00001e013384_P001 (ASK2, SKP1B, Zm00001e013384)

Aliases : ASK2, SKP1B, Zm00001e013384

Description : target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes

Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e013384_P001
Cluster	HCCA: Cluster_82

Target	Alias	Description	ECC score	Gene Family Method
Adi_g000276	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Adi_g011894	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Adi_g124189	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Aob_g00969	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Cba_g03619	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
LOC_Os02g13180.1	SK9, ASK9, LOC_Os02g13180	target protein binding component SKP1/ASK1 of...	0.05	OrthoFinder output from all 47 species
LOC_Os07g43250.1	ASK1, ATSKP1,...	target protein binding component SKP1/ASK1 of...	0.02	OrthoFinder output from all 47 species
LOC_Os09g10300.1	ASK4, SK4, LOC_Os09g10300	target protein binding component SKP1/ASK1 of...	0.07	OrthoFinder output from all 47 species
Nbi_g15125	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Solyc01g111650.3.1	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.01	OrthoFinder output from all 47 species
Tin_g13814	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquiTin ligase...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004298	threonine-type endopeptidase activity	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
MF	GO:0070003	threonine-type peptidase activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016072	Skp1_comp_dimer	114	161
IPR016073	Skp1_comp_POZ	10	68

External Links

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