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  5. Zm00001e013557_P001

Zm00001e013557_P001 (PMIT1, NRAMP1,...)


Aliases : PMIT1, NRAMP1, ATNRAMP1, Zm00001e013557

Description : metal cation transporter (NRAMP)


Gene families : OG0000603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013557_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g111897 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01807 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18301 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35230 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07848 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12684 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53925.t1 NRAMP6,... metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007529 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original... 0.02 OrthoFinder output from all 47 species
Cba_g42556 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.12G035200.1 PMIT1, NRAMP1,... metal cation transporter *(NRAMP) & original... 0.04 OrthoFinder output from all 47 species
Ceric.19G035300.1 ATNRAMP4,... metal cation transporter *(NRAMP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.39G032100.1 ATNRAMP4,... metal cation transporter *(NRAMP) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g06975 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33836 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08087 NRAMP6, ATNRAMP6 metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species
Gb_30457 ATNRAMP3, NRAMP3 metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species
LOC_Os03g11010.1 ATNRAMP2,... metal cation transporter (NRAMP) 0.05 OrthoFinder output from all 47 species
LOC_Os07g15370.1 NRAMP6,... metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
Len_g29106 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g30330 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430859g0010 NRAMP6, ATNRAMP6 metal cation transporter (NRAMP) 0.07 OrthoFinder output from all 47 species
MA_104715g0010 PMIT1, NRAMP1, ATNRAMP1 Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_884894g0010 NRAMP6, ATNRAMP6 Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
MA_9182156g0010 ATNRAMP2, NRAMP2 metal cation transporter (NRAMP) 0.03 OrthoFinder output from all 47 species
Mp4g07480.1 ATNRAMP4, NRAMP4 metal cation transporter (NRAMP) 0.05 OrthoFinder output from all 47 species
Nbi_g33813 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo173368 NRAMP6, ATNRAMP6 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Solyc11g018530.2.1 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species
Spa_g01161 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001046 NRAMP_fam 77 439
No external refs found!