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  5. Zm00001e013761_P001

Zm00001e013761_P001 (SPL2, Zm00001e013761)


Aliases : SPL2, Zm00001e013761

Description : transcription factor (SBP)


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013761_P001
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT1G53160 SPL4 squamosa promoter binding protein-like 4 0.03 OrthoFinder output from all 47 species
AT1G69170 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.12 OrthoFinder output from all 47 species
Adi_g010861 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13589 SPL3 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01159.t1 SPL7, ATSPL7,... SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14484.t1 SPL3, Aspi01Gene14484 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57316.t1 SPL2, Aspi01Gene57316 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0212.g058167 SPL3 SBP-type transcription factor & original description: CDS=1-1182 0.04 OrthoFinder output from all 47 species
Cre07.g345050 SPL3 RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
Dac_g24764 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46580.1 SPL3, LOC_Os04g46580 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g56170.1 SPL8, LOC_Os04g56170 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os05g33810.1 SPL7, ATSPL7,... transcription factor (SBP). copper homeostasis regulator (SPL7) 0.03 OrthoFinder output from all 47 species
LOC_Os08g39890.1 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g31438.1 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os11g30370.1 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Len_g52626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14940 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429891g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_20537g0010 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Nbi_g43554 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26439 SPL10 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48701 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14541 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g018780.3.1 SPL8, Solyc10g018780 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Spa_g15676 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 59 132
No external refs found!