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  5. Zm00001e014515_P001

Zm00001e014515_P001 (ATSUG1, RPT6A, Zm00001e014515)


Aliases : ATSUG1, RPT6A, Zm00001e014515

Description : regulatory component RPT6 of 26S proteasome


Gene families : OG0004338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e014515_P001

Target Alias Description ECC score Gene Family Method Actions
AT5G19990 ATSUG1, RPT6A regulatory particle triple-A ATPase 6A 0.06 OrthoFinder output from all 47 species
AT5G20000 No alias AAA-type ATPase family protein 0.06 OrthoFinder output from all 47 species
Aev_g07060 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Als_g11448 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Aop_g02128 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene40776.t1 ATSUG1, RPT6A,... regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ceric.37G056200.1 ATSUG1, RPT6A,... regulatory component *(RPT6) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000792.28 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.08 OrthoFinder output from all 47 species
Cre04.g216600 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.12 OrthoFinder output from all 47 species
Dcu_g04554 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
GSVIVT01017222001 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.08 OrthoFinder output from all 47 species
Gb_08346 ATSUG1, RPT6A regulatory component RPT6 of 26S proteasome 0.04 OrthoFinder output from all 47 species
LOC_Os02g11050.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.09 OrthoFinder output from all 47 species
LOC_Os06g39870.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Len_g15696 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Mp1g04290.1 ATSUG1, RPT6A regulatory component RPT6 of 26S proteasome 0.1 OrthoFinder output from all 47 species
Msp_g06734 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pp3c1_21950V3.1 ATSUG1, RPT6A,... regulatory particle triple-A ATPase 6A 0.02 OrthoFinder output from all 47 species
Sam_g13407 No alias regulatory component *(RPT6) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo441130 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Solyc05g018570.3.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Solyc05g018590.3.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB_C 88 143
IPR003959 ATPase_AAA_core 201 334
IPR041569 AAA_lid_3 358 400
No external refs found!