1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e015016_P002

Zm00001e015016_P002 (VPS20.2, Zm00001e015016)


Aliases : VPS20.2, Zm00001e015016

Description : component VPS20 of ESCRT-III complex


Gene families : OG0004858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004858_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015016_P002

Target Alias Description ECC score Gene Family Method Actions
Als_g16176 VPS20.2 component *(VPS20) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.24G055100.1 VPS20.2, Ceric.24G055100 component *(VPS20) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Ehy_g05498 VPS20.2 component *(VPS20) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01029745001 VPS20.1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.05 OrthoFinder output from all 47 species
Gb_37492 VPS20.2 component VPS20 of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g38300.1 VPS20.1, LOC_Os02g38300 component VPS20 of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001757 VPS20.2 component *(VPS20) of ESCRT-III complex & original... 0.04 OrthoFinder output from all 47 species
Spa_g29775 VPS20.2 component *(VPS20) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Spa_g29776 VPS20.2 component *(VPS20) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 73 265
No external refs found!