Aliases : Zm00001e015796
Description : RING-H2-class E3 ligase
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e015796_P001 | |
| Cluster | HCCA: Cluster_380 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00088p00040490 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G35330 | No alias | RING/U-box superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT1G49230 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G35000 | No alias | RING/U-box superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT2G46160 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G62690 | ATL5 | AtL5 | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g01244 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g08587 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g10391 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g13664 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g22410 | BRH1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g37431 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13717 | BRH1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14419 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g27941 | RHA3A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30397 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g58281 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g00286 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0436.g069938 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g37234 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.18G057500.1 | Ceric.18G057500 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.25G065700.1 | Ceric.25G065700 | not classified & original description: pacid=50593844... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.36G023100.1 | Ceric.36G023100 | not classified & original description: pacid=50568780... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g33658 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g43496 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g00774 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g06659 | ATL5 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g37746 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g06581 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g23056 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g24499 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g29562 | ATL2, TL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g30092 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008754001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01028306001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20461 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_28973 | BRH1 | Probable E3 ubiquitin-protein ligase RHA1A... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_36232 | No alias | IDF1 iron uptake IRT1-ubiquitin ligase | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g64620.1 | LOC_Os01g64620 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g36310.1 | LOC_Os05g36310 | RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g08820.1 | LOC_Os06g08820 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os06g16060.1 | LOC_Os06g16060 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g34560.1 | ATL43, LOC_Os06g34560 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g34620.1 | LOC_Os06g34620 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Len_g14676 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g23800 | BRH1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_41514g0010 | No alias | RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g06540 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28489 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g32480 | ATL43 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00299 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g03798 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06948 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g10421 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g17146 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26607 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g43484 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g26309 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g12572 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18666 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004696 | ATRING1, RING1 | not classified & original description: CDS=1-576 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0146.g023101 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g39799 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo448587 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g109200.4.1 | Solyc01g109200 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g067700.1.1 | ATL3, Solyc02g067700 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g083660.1.1 | Solyc02g083660 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g061250.3.1 | Solyc06g061250 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11939 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007103_P001 | Zm00001e007103 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e014832_P001 | Zm00001e014832 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023515_P001 | Zm00001e023515 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 152 | 195 |
| No external refs found! |
