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  5. Zm00001e016160_P003

Zm00001e016160_P003 (SPT, Zm00001e016160)


Aliases : SPT, Zm00001e016160

Description : transcription factor (bHLH)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016160_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00027110 BPEp, ZCW32,... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
Adi_g065834 LRL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109684 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06739 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23312 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25524 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27168 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05647 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06340 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12122 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21524 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26404 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03428 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04806 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15229 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40845 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08607 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29816 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g59345 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35709.t3 Aspi01Gene35709 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033854 No alias bHLH-type transcription factor & original description: CDS=1-1758 0.03 OrthoFinder output from all 47 species
Cba_g06236 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18078 HEC2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26289 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31314 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G032200.1 Ceric.11G032200 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.13G024600.1 PIL5, PIF1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.16G038400.1 Ceric.16G038400 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g11196 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23589 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00863 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01707 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02837 GT140, IND1, IND, EDA33 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07262 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07694 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12124 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18718 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23473 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010126001 No alias External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
GSVIVT01011109001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
LOC_Os03g12940.1 LOC_Os03g12940 transcription factor (bHLH). component FBX of SCF E3... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58330.1 UNE12, LOC_Os03g58330 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
LOC_Os03g58830.1 LOC_Os03g58830 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os07g05010.2 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
Len_g11076 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17352 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22983 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g24250 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g49441 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57123 HEC2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06200 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06729 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17585 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18800 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39067 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01217 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Msp_g11110 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13402 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24682 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01167 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07688 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18447 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03327 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19998 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43162 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ore_g43991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09614 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10627 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18900 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04652 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08425 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g12629 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ppi_g13565 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30747 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000803 LRL1 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026442 LRL2 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0235.g026543 No alias bHLH-type transcription factor & original description: CDS=1-2082 0.03 OrthoFinder output from all 47 species
Sam_g40903 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52771 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g083170.3.1 Solyc06g083170 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Spa_g24532 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31061 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51940 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08817 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13248 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13566 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15166 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 2 31
No external refs found!