Aliases : Zm00001e016211
Description : 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris (sp|p19684|roc5_nicsy : 154.0)
Gene families : OG0000715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000715_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00197820 | evm_27.TU.AmTr_v1... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00032260 | PDE322, CP33,... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00166p00060690 | ATRBP31, CP31,... | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G35410 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.07 | OrthoFinder output from all 47 species | |
| AT2G37220 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G52150 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G52380 | PDE322, CP33 | chloroplast RNA-binding protein 33 | 0.04 | OrthoFinder output from all 47 species | |
| AT4G24770 | ATRBP31, CP31,... | 31-kDa RNA binding protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g053286 | CP31B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g10264 | ATRBP31, CP31,... | plastidial ribonucleoprotein *(CP33a) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12603 | ATRBP31, CP31,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g39448 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g10701 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g05873 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07067 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07142 | ATRBP31, CP31,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g14081 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g026033 | No alias | not classified & original description: CDS=1-825 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0159.g053948 | ATRBP31, CP31,... | not classified & original description: CDS=143-1057 | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21785 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g00421 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g10561 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01007596001 | CP31B | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01027917001 | No alias | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01032039001 | No alias | Protein biosynthesis.organelle translation... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01032361001 | CP31B | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05747 | PDE322, CP33 | component psPSRP2 of small ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
| Gb_28108 | CP31B | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32176 | No alias | component psPSRP2 of small ribosomal subunit proteome | 0.02 | OrthoFinder output from all 47 species | |
| Gb_33449 | No alias | component psPSRP2 of small ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g57010.1 | LOC_Os02g57010 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g50110.1 | LOC_Os04g50110 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g06450.1 | PDE322, CP33,... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g43810.1 | LOC_Os07g43810 | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g44290.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os09g39180.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.07 | OrthoFinder output from all 47 species | |
| MA_10434075g0010 | CP31B | component psPSRP2 of small ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
| MA_474396g0010 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.03 | OrthoFinder output from all 47 species | |
| MA_482994g0010 | CP31B | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g13800.1 | No alias | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g24820.1 | CP31B | RNA-binding protein CP31B, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g03420.1 | No alias | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g06420 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g02906 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06962 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g11334 | CP31B | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19962 | CP31B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19963 | ATRBP31, CP31,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g27196 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g33947 | No alias | plastidial ribonucleoprotein *(CP33a) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g18180 | ATRBP31, CP31,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06842 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g23920 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g006940.4.1 | PDE322, CP33,... | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g111840.3.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g074750.3.1 | Solyc04g074750 | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc08g076840.3.1 | Solyc08g076840 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g007850.3.1 | Solyc09g007850 | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g05046 | ATRBP31, CP31,... | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g09087 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| No external refs found! |
