1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e016264_P001

Zm00001e016264_P001 (RPN5B, Zm00001e016264)


Aliases : RPN5B, Zm00001e016264

Description : regulatory component RPN5 of 26S proteasome


Gene families : OG0003644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003644_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016264_P001

Target Alias Description ECC score Gene Family Method Actions
AT5G09900 EMB2107, MSA, RPN5A 26S proteasome regulatory subunit, putative (RPN5) 0.03 OrthoFinder output from all 47 species
Adi_g082899 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g13431 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72263.t1 EMB2107, MSA,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z048700.1 RPN5B, Ceric.1Z048700 regulatory component *(RPN5) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.57 RPN5B Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Cre14.g632775 RPN5B Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
Dcu_g14355 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
LOC_Os03g63430.1 RPN5B, LOC_Os03g63430 regulatory component RPN5 of 26S proteasome 0.06 OrthoFinder output from all 47 species
MA_10427293g0010 RPN5B regulatory component RPN5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Ore_g37416 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 291 400
IPR040896 RPN5_C 409 438
No external refs found!