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  5. Zm00001e016275_P001

Zm00001e016275_P001 (ATRPA2, ATRPA32A,...)


Aliases : ATRPA2, ATRPA32A, RPA2, ROR1, RPA32A, Zm00001e016275

Description : component RPA2 of single-stranded-DNA binding RPA complex. component RPA2 of RPA presynaptic filament assembly factor complex


Gene families : OG0003036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016275_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00238780 ATRPA2,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00256940 ATRPA32B,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.09 OrthoFinder output from all 47 species
Ceric.28G042500.1 ATRPA32B,... component *(RPA2) of RPA presynaptic filament assembly... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020684.26 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.07 OrthoFinder output from all 47 species
Cre02.g100000 ATRPA32B, RPA32B Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.06 OrthoFinder output from all 47 species
GSVIVT01035537001 ATRPA2,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.13 OrthoFinder output from all 47 species
Gb_15876 ATRPA32B, RPA32B component RPA2 of single-stranded-DNA binding RPA... 0.08 OrthoFinder output from all 47 species
LOC_Os02g58220.1 ATRPA2,... component RPA2 of single-stranded-DNA binding RPA... 0.04 OrthoFinder output from all 47 species
LOC_Os06g47830.1 LOC_Os06g47830 component RPA2 of single-stranded-DNA binding RPA... 0.02 OrthoFinder output from all 47 species
Len_g10816 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
MA_10607g0010 ATRPA32B, RPA32B component RPA2 of single-stranded-DNA binding RPA... 0.05 OrthoFinder output from all 47 species
MA_8898824g0010 No alias component RPA2 of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
Mp5g22240.1 ATRPA32B, RPA32B component RPA2 of single-stranded-DNA binding RPA... 0.11 OrthoFinder output from all 47 species
Msp_g09786 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.06 OrthoFinder output from all 47 species
Smo440021 ATRPA2,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 OrthoFinder output from all 47 species
Solyc07g018300.3.1 ATRPA2,... component RPA2 of single-stranded-DNA binding RPA... 0.09 OrthoFinder output from all 47 species
Spa_g07704 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.09 OrthoFinder output from all 47 species
Spa_g07705 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.04 OrthoFinder output from all 47 species
Spa_g07706 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR014892 RPA_C 194 301
No external refs found!