Zm00001e016572_P001 (ADOF1, DOF1, Zm00001e016572)

Aliases : ADOF1, DOF1, Zm00001e016572

Description : transcription factor (DOF)

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e016572_P001
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00030p00153440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00160p00038440	HCA2, DOF5.6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00160p00046100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT2G28810	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT3G55370	OBP3	OBF-binding protein 3	0.04	OrthoFinder output from all 47 species
Adi_g024682	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g106349	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g18462	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g27376	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Als_g28312	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g18876	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g67430	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene66334.t1	TMO6, Aspi01Gene66334	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g11407	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g24626	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g39110	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g21081	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g05583	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g25853	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g27889	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g28279	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01002242001	ADOF2, DOF2	RNA biosynthesis.transcriptional activation.C2C2...	0.05	OrthoFinder output from all 47 species
Gb_23561	TMO6	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
LOC_Os03g16850.1	OBP3, LOC_Os03g16850	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os05g36900.1	LOC_Os05g36900	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Len_g28794	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Len_g39179	CDF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g26281	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
MA_175298g0010	CDF2	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Mp1g18540.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp2g20790.1	TMO6	transcription factor (DOF)	0.01	OrthoFinder output from all 47 species
Ore_g05845	TMO6	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g05846	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g10735	OBP3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14294	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g52876	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g06804	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g11469	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g31297	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Smo29563	OBP4	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Solyc06g062520.1.1	ADOF1, DOF1,...	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Tin_g14068	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e004809_P001	CDF3, Zm00001e004809	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	43	95

External Links

No external refs found!

Zm00001e016572_P001 (ADOF1, DOF1, Zm00001e016572)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation