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  5. Zm00001e017266_P001

Zm00001e017266_P001 (Zm00001e017266)


Aliases : Zm00001e017266

Description : C3H zinc finger transcription factor


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017266_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g080667 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Adi_g108712 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35283.t1 ZFN1, Aspi01Gene35283 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Cba_g02676 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Dcu_g06333 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01007563001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.06 OrthoFinder output from all 47 species
GSVIVT01019119001 ZFN1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os01g15350.1 LOC_Os01g15350 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Ore_g07739 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g13327 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0283.g027124 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Solyc06g071860.3.1 Solyc06g071860 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 45 70
IPR000571 Znf_CCCH 138 162
IPR000571 Znf_CCCH 93 118
IPR000571 Znf_CCCH 291 316
IPR000571 Znf_CCCH 337 362
No external refs found!