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  5. Zm00001e017365_P001

Zm00001e017365_P001 (LOF2, MYB105,...)


Aliases : LOF2, MYB105, ATMYB105, Zm00001e017365

Description : transcription factor (MYB)


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017365_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00225600 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.02 OrthoFinder output from all 47 species
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.01 OrthoFinder output from all 47 species
Adi_g081416 ATMYB119, MYB119 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23951 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.01 OrthoFinder output from all 47 species
Azfi_s1025.g095454 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: CDS=1-468 0.04 OrthoFinder output from all 47 species
Ceric.19G007400.1 LOF2, MYB105,... MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ceric.25G047900.1 MYB1, AtMYB1,... not classified & original description: pacid=50594505... 0.17 OrthoFinder output from all 47 species
Dac_g01703 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Dde_g02295 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.01 OrthoFinder output from all 47 species
Dde_g15236 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g42862 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10987 LOF2, MYB105, ATMYB105 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12960 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01007731001 AtMYB98, MYB98 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01008484001 MYB54, ATMYB54 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
GSVIVT01024774001 MYB64, AtMYB64 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
LOC_Os01g16810.1 LOF2, MYB105,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g28320.1 MYBR1, MYB44,... transcription factor (MYB) 0.09 OrthoFinder output from all 47 species
Pir_g26012 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Pir_g37889 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Pir_g44188 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002693 MYB56, AtMYB56 not classified & original description: CDS=2737-4053 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011562 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0226.g026344 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Solyc03g112890.1.1 AtMYB98, MYB98,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Solyc05g007870.3.1 LOF2, MYB105,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e030480_P001 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e037510_P001 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!