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  5. Zm00001e017976_P001

Zm00001e017976_P001 (NCED3, SIS7, STO1,...)


Aliases : NCED3, SIS7, STO1, ATNCED3, Zm00001e017976

Description : neoxanthin cleavage protein


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017976_P001
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00172590 evm_27.TU.AmTr_v1... Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.04 OrthoFinder output from all 47 species
AT4G18350 NCED2, ATNCED2 nine-cis-epoxycarotenoid dioxygenase 2 0.02 OrthoFinder output from all 47 species
Als_g23969 ATNCED5, NCED5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20615 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dcu_g39142 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
GSVIVT01029057001 NCED6, ATNCED6 Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.07 OrthoFinder output from all 47 species
GSVIVT01038080001 NCED3, SIS7,... Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.06 OrthoFinder output from all 47 species
Gb_04986 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.03 OrthoFinder output from all 47 species
LOC_Os03g44380.1 NCED3, SIS7,... neoxanthin cleavage protein 0.06 OrthoFinder output from all 47 species
LOC_Os07g05940.1 ATNCED9, NCED9,... neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species
Smo233638 NCED3, SIS7,... Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Solyc07g056570.1.1 NCED3, SIS7,... neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species
Solyc08g016720.1.1 NCED3, SIS7,... neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species
Spa_g10177 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Spa_g26569 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 127 595
No external refs found!