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  5. Zm00001e018008_P001

Zm00001e018008_P001 (EMB1989, RPB2, NRPB2,...)


Aliases : EMB1989, RPB2, NRPB2, Zm00001e018008

Description : DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis thaliana (sp|p38420|nrpb2_arath : 134.0)


Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018008_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G23780 DRD2, NRPE2,... nuclear RNA polymerase D2A 0.02 OrthoFinder output from all 47 species
Adi_g098465 EMB1989, RPB2, NRPB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01330 NRPC2 component *(NRPC2) of RNA polymerase III complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g17296 NRPC2 component *(NRPC2) of RNA polymerase III complex &... 0.01 OrthoFinder output from all 47 species
LOC_Os08g07480.1 DRD2, NRPE2,... subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V... 0.02 OrthoFinder output from all 47 species
Nbi_g17872 NRPC2 component *(NRPC2) of RNA polymerase III complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e040144_P001 DRD2, NRPE2,... DNA-directed RNA polymerases IV and V subunit 2... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007644 RNA_pol_bsu_protrusion 37 109
No external refs found!