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  5. Zm00001e018163_P001

Zm00001e018163_P001 (Zm00001e018163)


Aliases : Zm00001e018163

Description : transcription factor (DOF)


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018163_P001
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00213350 ADOF1, DOF1,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT2G37590 DOF2.4, ATDOF2.4 DNA binding with one finger 2.4 0.05 OrthoFinder output from all 47 species
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.06 OrthoFinder output from all 47 species
AT3G55370 OBP3 OBF-binding protein 3 0.04 OrthoFinder output from all 47 species
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.04 OrthoFinder output from all 47 species
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.05 OrthoFinder output from all 47 species
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g074897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074898 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077026 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078316 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081944 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113667 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11360 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16400 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27970 OBP3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03146 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44301.t1 OBP4, Aspi01Gene44301 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04480 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24626 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G014800.1 Ceric.11G014800 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.12G042700.1 TMO6, Ceric.12G042700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G013700.1 TMO6, Ceric.19G013700 transcription factor *(DOF) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.26G037300.1 TMO6, Ceric.26G037300 transcription factor *(DOF) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.35G046000.1 OBP4, Ceric.35G046000 transcription factor *(DOF) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g05330 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07407 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04712 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04770 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10677 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005057001 TMO6 RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
GSVIVT01016538001 OBP3 RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01025119001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
Gb_20144 HCA2, DOF5.6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Gb_20867 CDF3 Cyclic dof factor 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g09720.1 ADOF2, DOF2,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g48290.1 LOC_Os01g48290 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os02g49440.1 ADOF1, DOF1,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g16850.1 OBP3, LOC_Os03g16850 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g55610.1 ADOF2, DOF2,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g60630.1 LOC_Os03g60630 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g47990.1 LOC_Os04g47990 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
LOC_Os05g02150.1 OBP3, LOC_Os05g02150 transcription factor (DOF) 0.11 OrthoFinder output from all 47 species
LOC_Os05g36900.1 LOC_Os05g36900 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os07g32510.1 TMO6, LOC_Os07g32510 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os12g38200.1 LOC_Os12g38200 transcription factor (DOF) 0.11 OrthoFinder output from all 47 species
Len_g10120 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
MA_16692g0010 TMO6 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
MA_83624g0010 TMO6 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Mp2g20790.1 TMO6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Nbi_g01077 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05846 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26476 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41458 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10327 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16291 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26155 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32527 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22840 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02806 DAG1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53347 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61204 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517 CDF3 transcription factor *(DOF) & original description: CDS=154-1659 0.03 OrthoFinder output from all 47 species
Smo29563 OBP4 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Solyc02g077950.3.1 Solyc02g077950 transcription factor (DOF) 0.07 OrthoFinder output from all 47 species
Solyc02g077960.3.1 TMO6, Solyc02g077960 transcription factor (DOF) 0.08 OrthoFinder output from all 47 species
Solyc02g090220.3.1 OBP1, Solyc02g090220 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Solyc03g112930.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc06g071480.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc06g076030.3.1 Solyc06g076030 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc08g082910.2.1 Solyc08g082910 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc09g010680.3.1 Solyc09g010680 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Solyc10g086440.2.1 DOF2.4,... transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Solyc11g066050.1.1 Solyc11g066050 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Solyc11g072500.2.1 TMO6, Solyc11g072500 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Spa_g07062 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12100 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01918 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002951_P002 Zm00001e002951 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e012437_P001 ADOF1, DOF1,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e041444_P001 Zm00001e041444 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 110 164
No external refs found!