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  5. Zm00001e018507_P001

Zm00001e018507_P001 (LUX, PCL1, Zm00001e018507)


Aliases : LUX, PCL1, Zm00001e018507

Description : component LUX of circadian clock Evening complex (EC)


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018507_P001
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00128190 evm_27.TU.AmTr_v1... Transcription factor LUX OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G46640 LUX, PCL1 Homeodomain-like superfamily protein 0.11 OrthoFinder output from all 47 species
Adi_g015963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06631 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.01 OrthoFinder output from all 47 species
Aop_g42522 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g58078 MYBC1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g57194 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59744 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.1Z080900.1 MYBC1, Ceric.1Z080900 not classified & original description: pacid=50607904... 0.03 OrthoFinder output from all 47 species
Ceric.31G008400.1 Ceric.31G008400 subgroup ARR-B transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01024916001 LUX, PCL1 Multi-process regulation.circadian clock.evening element... 0.12 OrthoFinder output from all 47 species
LOC_Os01g74020.1 LUX, PCL1, LOC_Os01g74020 component LUX of circadian clock Evening complex (EC) 0.03 OrthoFinder output from all 47 species
Nbi_g06158 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g09918 MYBC1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30461 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ore_g18795 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27542 MYBC1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g11607 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Solyc06g005680.4.1 LUX, PCL1, Solyc06g005680 component LUX of circadian clock Evening complex (EC) 0.21 OrthoFinder output from all 47 species
Solyc06g076350.3.1 Solyc06g076350 component LUX of circadian clock Evening complex (EC) 0.13 OrthoFinder output from all 47 species
Spa_g02524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06387 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013844_P002 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e016123_P001 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 140 188
No external refs found!