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  5. Zm00001e019488_P002

Zm00001e019488_P002 (ARFA1E, ATARFA1E,...)


Aliases : ARFA1E, ATARFA1E, Zm00001e019488

Description : ARF-GTPase


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019488_P002

Target Alias Description ECC score Gene Family Method Actions
Aev_g07015 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12102 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06881 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.129 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Ehy_g17402 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013765001 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
GSVIVT01017654001 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Gb_07323 ARFA1E, ATARFA1E ARF-GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os03g59740.1 ATARFA1B,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os05g41060.1 ATARFA1F,... ARF-GTPase 0.04 OrthoFinder output from all 47 species
MA_9371872g0010 ATARL1, ARF3, ARL1 ADP-ribosylation factor 1 OS=Brassica rapa subsp.... 0.02 OrthoFinder output from all 47 species
Mp8g07320.1 ATARFB1C, ARFB1C ARF-GTPase 0.02 OrthoFinder output from all 47 species
Pp3c12_14940V3.1 ARFA1E,... ADP-ribosylation factor A1E 0.03 OrthoFinder output from all 47 species
Ppi_g25799 ATARFA1F, ARFA1F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000285 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: CDS=1-882 0.02 OrthoFinder output from all 47 species
Solyc01g008000.3.1 ATARFA1B,... ARF-GTPase 0.05 OrthoFinder output from all 47 species
Solyc01g100870.3.1 ARF1A1C, Solyc01g100870 ARF-GTPase 0.03 OrthoFinder output from all 47 species
Solyc05g005190.3.1 ATARFA1F,... ARF-GTPase 0.04 OrthoFinder output from all 47 species
Spa_g05142 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49717 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51715 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05371 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05379 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 7 177
No external refs found!