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  5. Zm00001e019653_P002

Zm00001e019653_P002 (Zm00001e019653)


Aliases : Zm00001e019653

Description : TRAF1 endomembrane trafficking ATG6-stability regulator protein


Gene families : OG0003009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003009_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Zm00001e019653_P002

Target Alias Description ECC score Gene Family Method Actions
Aev_g48943 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
Als_g21634 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
Aob_g16175 No alias endomembrane trafficking ATG6-stability regulator... 0.04 OrthoFinder output from all 47 species
Cba_g21614 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
Ceric.26G060700.1 Ceric.26G060700 endomembrane trafficking ATG6-stability regulator... 0.04 OrthoFinder output from all 47 species
Cre12.g494000 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.01 OrthoFinder output from all 47 species
Dcu_g03193 No alias endomembrane trafficking ATG6-stability regulator... 0.05 OrthoFinder output from all 47 species
Ehy_g07893 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
LOC_Os01g56800.1 LOC_Os01g56800 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.06 OrthoFinder output from all 47 species
LOC_Os05g43280.1 LOC_Os05g43280 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.1 OrthoFinder output from all 47 species
Lfl_g10345 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
MA_10434493g0010 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 OrthoFinder output from all 47 species
Mp8g14880.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.03 OrthoFinder output from all 47 species
Nbi_g17444 No alias endomembrane trafficking ATG6-stability regulator... 0.04 OrthoFinder output from all 47 species
Ore_g36306 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018228 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
Sam_g08395 No alias endomembrane trafficking ATG6-stability regulator... 0.04 OrthoFinder output from all 47 species
Solyc03g005430.4.1 Solyc03g005430 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Solyc09g089560.4.1 Solyc09g089560 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.03 OrthoFinder output from all 47 species
Tin_g12910 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 72 189
No external refs found!