Zm00001e020011_P001 (Zm00001e020011)

Aliases : Zm00001e020011

Description : transcription factor (MYB-related)

Gene families : OG0000994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000994_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e020011_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00166880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
Adi_g058884	ATTRB1, TRB1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g28115	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.02	OrthoFinder output from all 47 species
Aspi01Gene52673.t1	Aspi01Gene52673	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g12893	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.03	OrthoFinder output from all 47 species
Ceric.09G087300.1	ATTRB1, TRB1,...	not classified & original description: pacid=50587750...	0.04	OrthoFinder output from all 47 species
Ceric.38G003600.1	ATTRB1, TRB1,...	not classified & original description: pacid=50579492...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020538.49	TRFL3	No description available	0.01	OrthoFinder output from all 47 species
Ehy_g08974	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.04	OrthoFinder output from all 47 species
LOC_Os01g51154.1	LOC_Os01g51154	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
Len_g08998	ATTRB1, TRB1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g48232	ATTRB1, TRB1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g07466	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.03	OrthoFinder output from all 47 species
Pir_g08695	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.03	OrthoFinder output from all 47 species
Solyc11g044320.2.1	ATTRB1, TRB1,...	PRC2-recruiting factor (TRB). transcription factor (MYB-related)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
BP	GO:0043933	protein-containing complex organization	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
CC	GO:0032299	ribonuclease H2 complex	IEP	HCCA
BP	GO:0032954	regulation of cytokinetic process	IEP	HCCA
BP	GO:0032955	regulation of division septum assembly	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051301	cell division	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901891	regulation of cell septum assembly	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	5	56
IPR005818	Histone_H1/H5_H15	115	173

External Links

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Zm00001e020011_P001 (Zm00001e020011)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation