Zm00001e020013_P001 (ATVTI13, VTI13, Zm00001e020013)

Aliases : ATVTI13, VTI13, Zm00001e020013

Description : VTI group Qb-type SNARE protein

Gene families : OG0002267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002267_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e020013_P001

Target	Alias	Description	ECC score	Gene Family Method
AT3G29100	ATVTI13, VTI13	vesicle transport V-snare 13	0.03	OrthoFinder output from all 47 species
AT5G39510	SGR4, ZIG1,...	Vesicle transport v-SNARE family protein	0.03	OrthoFinder output from all 47 species
Ala_g00976	ATVTI13, VTI13	Qb-type VTI-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Azfi_s0002.g001214	SGR4, ZIG1,...	Qb-type VTI-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Ceric.06G059500.1	SGR4, ZIG1,...	Qb-type VTI-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Cre13.g577500	VTI12, VTI1B, ATVTI12	Vesicle trafficking.SNARE target membrane recognition...	0.01	OrthoFinder output from all 47 species
LOC_Os01g51120.1	ATVTI13, VTI13,...	VTI group Qb-type SNARE protein	0.06	OrthoFinder output from all 47 species
Mp1g12970.1	SGR4, ZIG1,...	VTI group Qb-type SNARE protein	0.02	OrthoFinder output from all 47 species
Nbi_g00258	ATVTI13, VTI13	Qb-type VTI-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Pp3c17_17260V3.1	SGR4, ZIG1,...	Vesicle transport v-SNARE family protein	0.01	OrthoFinder output from all 47 species
Solyc05g013050.3.1	VTI12, VTI1B,...	VTI group Qb-type SNARE protein	0.03	OrthoFinder output from all 47 species
Tin_g43976	SGR4, ZIG1,...	Qb-type VTI-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007705	Vesicle_trsprt_v-SNARE_N	12	90

External Links

No external refs found!